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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6005113 chr22:27037014 C/T GCAT chr22:38203912-38213183:+ -0.54 -7.15 3.37E-12 Box Plot
THCA rs6005113 chr22:27037014 C/T GGA1 chr22:38004482-38029571:+ -0.92 -10.75 2.79E-24 Box Plot
THCA rs6005113 chr22:27037014 C/T GRAMD4 chr22:46971909-47075687:+ -0.66 -6.11 2.02E-9 Box Plot
THCA rs6005113 chr22:27037014 C/T GTPBP1 chr22:39101728-39134304:+ -0.83 -9.6 4.37E-20 Box Plot
THCA rs6005113 chr22:27037014 C/T HDAC10 chr22:50683612-50689834:- -0.6 -7.54 2.45E-13 Box Plot
THCA rs6005113 chr22:27037014 C/T HIC2 chr22:21771693-21805752:+ -0.58 -7.51 3.02E-13 Box Plot
THCA rs6005113 chr22:27037014 C/T HMGXB4 chr22:35653445-35691800:+ -0.52 -8.24 1.63E-15 Box Plot
THCA rs6005113 chr22:27037014 C/T HSCB chr22:29138019-29153503:+ -0.86 -10.77 2.36E-24 Box Plot
THCA rs6005113 chr22:27037014 C/T IFT27 chr22:37154246-37172300:- -0.59 -7.34 9.27E-13 Box Plot
THCA rs6005113 chr22:27037014 C/T INPP5J chr22:31518717-31530682:+ -0.49 -6.92 1.41E-11 Box Plot
THCA rs6005113 chr22:27037014 C/T JOSD1 chr22:39081548-39097561:- -0.47 -6.17 1.5E-9 Box Plot
THCA rs6005113 chr22:27037014 C/T KLHL22 chr22:20795806-20850170:- -0.97 -11.06 1.83E-25 Box Plot
THCA rs6005113 chr22:27037014 C/T L3MBTL2 chr22:41601209-41627275:+ -1.18 -11.7 5.5E-28 Box Plot
THCA rs6005113 chr22:27037014 C/T LDOC1L chr22:44888452-44894178:- -0.54 -7.76 5.08E-14 Box Plot
THCA rs6005113 chr22:27037014 C/T LIMK2 chr22:31608225-31676066:+ -0.56 -6.66 7.52E-11 Box Plot